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Publications

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Publications

Dark state‑mediated photobleaching in mCherry‑based red fluorescent proteins

Premashis Manna, Mark A. Hix, Srijit Mukherjee, Alice R. Walker, and Ralph Jimenez

bioRxiv, 2026


Prior to OSU

Energetic driving force for LHCII clustering in plant membranes

Premashis Manna, Madeline Hoffmann, Thomas Davies, Katherine H Richardson, Matthew P Johnson, Gabriela S Schlau-Cohen

Science Advances, 2023

Single-molecule acceptor rise time (smART) FRET for nanoscale distance sensitivity

Jiajia Guo, Xuyan Chen, Premashis Manna, Xingcheng Lin, Madelyn N Scott, Wei Jia Chen, Mikaila Hoffman, Bin Zhang, Gabriela S Schlau-Cohen

biorxiv, 2023

Conformational dynamics of mCherry variants: a link between sidechain motions and fluorescence brightness

Srijit Mukherjee, Premashis Manna, Nancy Douglas, Prem P. Chapagain and Ralph Jimenez (2023)

The Journal of Physical Chemistry B, 2023

Directed evolution of a bright variant of mCherry: Suppression of non-radiative decay by fluorescence lifetime selections

Srijit Mukherjee, Premashis Manna, Sheng-Ting Hung, Felix Vietmeyer, Pia Friis, Amy Palmer and Ralph Jimenez

Journal of Physical Chemistry B, 2022

Photoprotective conformational dynamics of photosynthetic light-harvesting proteins

Premashis Manna and Gabriela S. Schlau-Cohen

BBA – Bioenergetics, 2022

Membrane-dependent heterogeneity of LHCII characterized using single-molecule spectroscopy

Premashis Manna, Thomas Davies, Madeline Hoffmann, Matthew P. Johnson and Gabriela S. Schlau-Cohen

Biophysical Journal, 2021

Engineering of a brighter variant of the FusionRed fluorescent protein using lifetime flow-cytometry and structure guided mutations

Srijit Mukherjee, Sheng-Ting Hung, Nancy Douglas, Premashis Manna, Connor Thomas, Annika Ekrem, Amy E. Palmer and Ralph Jimenez

Biochemistry, 2020

Directed Evolution of Excited State Lifetime and Brightness in FusionRed using a Microfluidic Sorter

Premashis Manna, Sheng-Ting Hung, Srijit Mukherjee, Pia Friis, David Simpson, Maria Lo, Amy E. Palmer and Ralph Jimenez

Integrative Biology, 2018

Genetically-Encoded Biosensors for Visualizing Live-cell Biochemical Activity at Superresolution

Gary C.H. Mo, Brian Ross, Fabian Hertel, Premashis Manna, Xinxing Yang, Eric Greenwald, Chris Booth, Ashlee M. Plummer, Brian Tenner, Zan Chen, Yuxiao Wang, Eileen J. Kennedy, Philip A. Cole, Karen G. Fleming, Amy Palmer, Ralph Jimenez, Jie Xiao, Peter Dedecker and Jin Zhang

Nature Methods, 2017

High-speed multiparameter photophysical analyses of fluorophore libraries

Kevin M. Dean, Lloyd M. Davis, Jennifer L. Lubbeck, Premashis Manna, Pia Friis, Amy E. Palmer and Ralph Jimenez

Analytical Chemistry, 2015

Time and Frequency-Domain Measurement of Ground-State Recovery Times in Red Fluorescent Proteins

Premashis Manna and Ralph Jimenez

The Journal of Physical Chemistry B, 2015

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